NAME
	rubberbonds - form a stretchable bond between two atoms

AUTHOR

	Nihar Gokhale

	gokhale@mcs.anl.gov


SUMMARY
	Name	rubberbonds
	Type	Mapper
	Inputs	molecule - 	molecule REQUIRED

	Outputs	rubberbonds - 	geom

	Parameters
	Name		Type	Default	Choices
	equilibrium radius	float	0.29	0	1

DESCRIPTION

	Given a molecule,
	atoms within a molecule.  The cylinders start with a
	default radius for the equilibrium condition.  As the
	bond gets stronger (shorter distance), the radius is
	enlarged proportionately.  As bonds get weaker (longer
	distance), the cylinders become long and thin, and, at
	some point "pop" (i.e. are no longer visible).

INPUTS
	molecule - molecule

PARAMETERS

equilibrium radius (float)

OUTPUTS
	rubberbonds - geom

EXAMPLE NETWORKS

	/home/gokhale/avs/bash/rubber.net

		Big Read Structure File
			|
			|
		-------------------------
		|			|
	Display Molecule		rubberbonds
		|			|
		|			|
		-------------------------
			|
			|
			geometry viewer


RELATED MODULES

	cylinders - available on avs.ncsc.org


SEE ALSO

	/home/source/graphics/avs-mcs-source/Chemistry/CHEMcon_r.c