#!/usr/bin/avs -network version 5.0 (50.25 sg) module "geometry viewer.user.0" -xy 158,262 module tube.user.1 -xy 268,152 -ex $Path/avs_library/mongo module coord2geom.user.2 -xy 268,32 -ex /usr/people/reed/avs/modules/ftplaunch/coord_to_geom module DMOL_to_field.user.3 -xy 78,32 -ex /usr/people/reed/avs/modules/ftplaunch/dmol_to_field module isosurface.user.4 -xy 78,182 -ex $Path/avs_library/tile module "generate colormap.user.5" -xy 0,112 port_connect tube.user.1:0 "geometry viewer.user.0":0 port_connect coord2geom.user.2:0 tube.user.1:0 port_connect DMOL_to_field.user.3:0 isosurface.user.4:0 port_connect DMOL_to_field.user.3:0 isosurface.user.4:1 port_connect isosurface.user.4:0 "geometry viewer.user.0":0 port_connect "generate colormap.user.5":0 isosurface.user.4:2 parm_set coord2geom.user.2:filename /usr/people/reed/avs/avsdata/toloh_1.dcar parm_set coord2geom.user.2:"file type" dcar parm_set DMOL_to_field.user.3:File_Name /usr/people/reed/avs/avsdata/toloh_1_dens.grd parm_set isosurface.user.4:level 0.001000000047 -range 0 86.48222351 geom_set_scene -scene "geometry viewer.user.0" geom_set_camera_name "Camera 1" geom_resize_camera -view "Camera 1" 376 416 # # State for view: Camera 1 # geom_set_position -view "Camera 1" 0 0 -12 geom_set_view_modes -depth_cue 0 -view "Camera 1" geom_set_view_modes -polygonal_spheres 0 -view "Camera 1" geom_set_view_modes -stereo 0 -view "Camera 1" geom_set_view_modes -head_tracking 1 -view "Camera 1" geom_set_view_modes -z_buffer 1 -view "Camera 1" geom_set_camera_params -view "Camera 1" -front -88 -back 112 geom_set_depth_cue_params "Camera 1" -scale 0.1 # # Light state # geom_set_light -light 1 -type directional -state 1 geom_set_light -type ambient -state 1 # # State for object: top # geom_set_cur_cli_obj top geom_set_subdiv 6.000 geom_set_obj_window -5.6 7.2 -5.8 7.6 -4.8 6 # # State for object: molecule # geom_set_cur_cli_obj -push geom_set_name_context tube.user.1 geom_create_obj molecule -mod tube.user.1 geom_set_name_context geom_set_cur_cli_obj -pop # # State for object: isosurface # geom_set_cur_cli_obj -push geom_set_name_context isosurface.user.4 geom_create_obj isosurface -mod isosurface.user.4 geom_set_trans_mode parent geom_set_color 0.990 0.990 0.990 geom_set_properties -amb 0.300 -diff 0.700 -spec 0.000 -exp 50.000 \ -trans 0.592 -spec_col 0.990 0.990 0.990 geom_set_obj_window -5.6 7.2 -5.8 7.6 -4.8 6 geom_set_name_context geom_set_cur_cli_obj -pop shell "ui" shell panel Application -w app_panel -p ui -xy 0,0 -wh 260,984 panel "Top Level Stack" -w master_stack -p Application -xy 2,100 -wh 256,992 panel tube.user.1 -w panel -p "Top Level Stack" -xy 0,64 -wh 110,150 manipulator tube.user.1:radius -w dial -p tube.user.1 -xy 10,10 -wh 90,130 panel coord2geom.user.2 -w panel -p "Top Level Stack" -xy 0,86 -wh 256,840 manipulator coord2geom.user.2:filename -w browser -p coord2geom.user.2 \ -xy 10,10 -wh 236,194 manipulator "coord2geom.user.2:file type" -w choice_browser -p coord2geom.user.2 \ -xy 10,204 -wh 236,151 manipulator coord2geom.user.2:units -w choice_browser -p coord2geom.user.2 \ -xy 10,355 -wh 236,151 manipulator coord2geom.user.2:scale -w typein_real -p coord2geom.user.2 \ -xy 10,506 -wh 118,22 manipulator coord2geom.user.2:Representation -w choice_browser -p coord2geom.user.2 \ -xy 10,528 -wh 236,151 manipulator "coord2geom.user.2:Show Hydrogens" -w choice_browser -p coord2geom.user.2 \ -xy 10,679 -wh 236,151 panel DMOL_to_field.user.3 -w panel -p "Top Level Stack" -xy 0,152 -wh 256,214 manipulator DMOL_to_field.user.3:File_Name -w browser -p DMOL_to_field.user.3 \ -xy 10,10 -wh 236,194 panel isosurface.user.4 -w panel -p "Top Level Stack" -xy 0,152 -wh 228,216 manipulator isosurface.user.4:level -w dial -p isosurface.user.4 \ -xy 10,10 -wh 90,130 manipulator "isosurface.user.4:optimize surf" -w toggle -p isosurface.user.4 \ -xy 100,10 -wh 118,22 manipulator "isosurface.user.4:optimize wire" -w toggle -p isosurface.user.4 \ -xy 10,140 -wh 118,22 manipulator "isosurface.user.4:generate normals" -w toggle -p isosurface.user.4 \ -xy 10,162 -wh 118,22 manipulator "isosurface.user.4:flip normals" -w toggle -p isosurface.user.4 \ -xy 10,184 -wh 118,22 panel "generate colormap.user.5" -w panel -p "Top Level Stack" \ -xy 0,152 -wh 256,566 manipulator "generate colormap.user.5:colormap" -w color_editor -p "generate colormap.user.5" \ -xy 10,10 -wh 236,416 manipulator "generate colormap.user.5:lo value" -w dial -p "generate colormap.user.5" \ -xy 10,426 -wh 90,130 manipulator "generate colormap.user.5:hi value" -w dial -p "generate colormap.user.5" \ -xy 100,426 -wh 90,130 panel "geometry viewer.user.0!display" -w container -p ui -xy 487,2 -wh 416,488\ -P zoom_coords string "0 0 0 0 0 <$NULL> 0 0 0 0" manipulator "geometry viewer.user.0":object -w none manipulator "geometry viewer.user.0":"Update Always" -w none manipulator "geometry viewer.user.0":"Update Image" -w none # End of file