#!/usr/bin/avs -network
version 5.0 (50.25 sg)
module "Display molecule.user.0" -xy 150,92 -ex $Path/chem_lib/CHEMmongo
module rubberbonds.user.1 -xy 302,92 -ex /usr/local/avs-mcs/ExampleNetworks/Rubberbonds/Rubberbonds
module "Big Read structure file.user.2" -xy 150,36 -ex /usr/local/avs-mcs/./Chemistry/CHEMcon_r
module "geometry viewer.user.3" -xy 230,140
port_connect "Display molecule.user.0":0 "geometry viewer.user.3":0
port_connect rubberbonds.user.1:0 "geometry viewer.user.3":0
port_connect "Big Read structure file.user.2":0 "Display molecule.user.0":0
port_connect "Big Read structure file.user.2":0 rubberbonds.user.1:0
geom_set_scene -scene "geometry viewer.user.3"
geom_set_camera_name "Camera 1"
geom_resize_camera -view "Camera 1" 157 156
#
# State for view: Camera 1
#
geom_set_position -view "Camera 1" 0 0 -12
geom_set_view_modes -depth_cue 0 -view "Camera 1"
geom_set_view_modes -polygonal_spheres 0 -view "Camera 1"
geom_set_view_modes -stereo 0 -view "Camera 1"
geom_set_view_modes -head_tracking 1 -view "Camera 1"
geom_set_view_modes -z_buffer 1 -view "Camera 1"
geom_set_camera_params -view "Camera 1" -front -88 -back 112
geom_set_depth_cue_params "Camera 1" -scale 0.1
#
# Light state
#
geom_set_light -light 1 -type directional -state 1
geom_set_light -type ambient -state 1
#
# State for object: top
#
geom_set_cur_cli_obj top
shell "ui" shell
 panel Application -w app_panel -p ui -xy 0,0 -wh 260,920
  panel "Top Level Stack" -w master_stack -p Application -xy 2,100 -wh 255,740
   panel "Display molecule.user.0" -w panel -p "Top Level Stack" \
       -xy 0,65 -wh 252,630
    manipulator "Display molecule.user.0:Representation" -w radio_buttons -p "Display molecule.user.0" \
        -xy 7,8 -wh 117,112
    manipulator "Display molecule.user.0:Atom Scale" -w slider -p "Display molecule.user.0" \
        -xy 7,116 -wh 235,32
    manipulator "Display molecule.user.0:Transparency" -w slider -p "Display molecule.user.0" \
        -xy 7,147 -wh 235,32
    manipulator "Display molecule.user.0:Molecule Selector:" -w choice_browser -p "Display molecule.user.0" \
        -xy 7,180 -wh 235,258
    manipulator "Display molecule.user.0:Bond Highlite" -w radio_buttons -p "Display molecule.user.0" \
        -xy 7,450 -wh 117,180
   panel rubberbonds.user.1 -w panel -p "Top Level Stack" -xy 0,65 -wh 252,113
    manipulator "rubberbonds.user.1:min thickness" -w slider -p rubberbonds.user.1 \
        -xy 7,8 -wh 235,32
    manipulator "rubberbonds.user.1:equil. thickness" -w slider -p rubberbonds.user.1 \
        -xy 7,41 -wh 235,32
    manipulator "rubberbonds.user.1:max thickness" -w slider -p rubberbonds.user.1 \
        -xy 7,72 -wh 235,32
   panel "Big Read structure file.user.2" -w panel -p "Top Level Stack" \
       -xy 0,110 -wh 252,212
    manipulator "Big Read structure file.user.2:Structure files" -w browser -p "Big Read structure file.user.2" \
        -xy 7,8 -wh 235,188
 panel "geometry viewer.user.3!display" -w container -p ui -xy 747,87 -wh 241,272\
   -P zoom_coords string "0 0 0 0 0 <$NULL> 0 0 0 0"
manipulator "geometry viewer.user.3":object -w none
manipulator "geometry viewer.user.3":"Update Always" -w none
manipulator "geometry viewer.user.3":"Update Image" -w none
# End of file